Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp28Q8CGV8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp28Q8CGV8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp28Q8CGV8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Mmp28Q8CGV8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp28Q8CGV8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Mmp28Q8CGV8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Mmp28Q8CGV8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp28Q8CGV8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Gm22567-201ENSMUST00000175542 342 ntBASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp28Q8CGV8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp28Q8CGV8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Mmp28Q8CGV8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms