Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim52Q8CDV4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim52Q8CDV4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim52Q8CDV4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trim52Q8CDV4 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.9■■□□□ 1.74
Trim52Q8CDV4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Mir7075-201ENSMUST00000184187 82 ntBASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Gm43530-201ENSMUST00000195920 274 ntBASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trim52Q8CDV4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.88■■□□□ 1.73
Trim52Q8CDV4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim52Q8CDV4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim52Q8CDV4 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.88■■□□□ 1.73
Trim52Q8CDV4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim52Q8CDV4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim52Q8CDV4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.87■■□□□ 1.73
Trim52Q8CDV4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim52Q8CDV4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
Trim52Q8CDV4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Trim52Q8CDV4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.86■■□□□ 1.73
Trim52Q8CDV4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim52Q8CDV4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim52Q8CDV4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim52Q8CDV4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Trim52Q8CDV4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Trim52Q8CDV4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim52Q8CDV4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim52Q8CDV4 Gm37415-201ENSMUST00000192265 2054 ntBASIC25.83■■□□□ 1.72
Trim52Q8CDV4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Trim52Q8CDV4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim52Q8CDV4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim52Q8CDV4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim52Q8CDV4 Gm43403-201ENSMUST00000198011 1786 ntBASIC25.81■■□□□ 1.72
Trim52Q8CDV4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Gm12251-201ENSMUST00000117893 792 ntBASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim52Q8CDV4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Gm43017-201ENSMUST00000198296 752 ntBASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.79■■□□□ 1.72
Trim52Q8CDV4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Gm8493-201ENSMUST00000196881 489 ntBASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Trim52Q8CDV4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Gm21168-201ENSMUST00000199646 1096 ntBASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Gm43173-201ENSMUST00000202246 593 ntBASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim52Q8CDV4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim52Q8CDV4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim52Q8CDV4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Trim52Q8CDV4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim52Q8CDV4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Trim52Q8CDV4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim52Q8CDV4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms