Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Q8CDN1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Q8CDN1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.39■■□□□ 1.01
Q8CDN1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.38■■□□□ 1.01
Q8CDN1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Q8CDN1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Q8CDN1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Q8CDN1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
Q8CDN1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.38■■□□□ 1.01
Q8CDN1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.38■■□□□ 1.01
Q8CDN1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Q8CDN1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Q8CDN1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Q8CDN1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm12821-201ENSMUST00000120022 600 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Q8CDN1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.36■■□□□ 1.01
Q8CDN1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.36■■□□□ 1.01
Q8CDN1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.36■■□□□ 1.01
Q8CDN1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.36■■□□□ 1.01
Q8CDN1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Q8CDN1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Q8CDN1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Q8CDN1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.33■■□□□ 1.01
Q8CDN1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Q8CDN1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.32■■□□□ 1
Q8CDN1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Q8CDN1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.3■■□□□ 1
Q8CDN1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.3■■□□□ 1
Q8CDN1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.3■■□□□ 1
Q8CDN1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.3■■□□□ 1
Q8CDN1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Q8CDN1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.29■■□□□ 1
Q8CDN1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms