Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Q8CDN1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Q8CDN1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.39■■□□□ 1.01
Q8CDN1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Q8CDN1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.38■■□□□ 1.01
Q8CDN1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Q8CDN1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Q8CDN1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Q8CDN1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.38■■□□□ 1.01
Q8CDN1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.38■■□□□ 1.01
Q8CDN1 Gm7143-201ENSMUST00000222811 859 ntBASIC21.38■■□□□ 1.01
Q8CDN1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Q8CDN1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Q8CDN1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Q8CDN1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm12821-201ENSMUST00000120022 600 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Gm45417-201ENSMUST00000209533 758 ntBASIC21.37■■□□□ 1.01
Q8CDN1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Q8CDN1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Q8CDN1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.36■■□□□ 1.01
Q8CDN1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.36■■□□□ 1.01
Q8CDN1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.36■■□□□ 1.01
Q8CDN1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.36■■□□□ 1.01
Q8CDN1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Q8CDN1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Q8CDN1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Q8CDN1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Q8CDN1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Q8CDN1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.34■■□□□ 1.01
Q8CDN1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Q8CDN1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.33■■□□□ 1.01
Q8CDN1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Q8CDN1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.33■■□□□ 1
Q8CDN1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.32■■□□□ 1
Q8CDN1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Q8CDN1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Q8CDN1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Q8CDN1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.3■■□□□ 1
Q8CDN1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.3■■□□□ 1
Q8CDN1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.3■■□□□ 1
Q8CDN1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.3■■□□□ 1
Q8CDN1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Q8CDN1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Q8CDN1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.29■■□□□ 1
Q8CDN1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.29■■□□□ 1
Q8CDN1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms