Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lrif1Q8CDD9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrif1Q8CDD9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrif1Q8CDD9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrif1Q8CDD9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrif1Q8CDD9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrif1Q8CDD9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Lrif1Q8CDD9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrif1Q8CDD9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Lrif1Q8CDD9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrif1Q8CDD9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrif1Q8CDD9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrif1Q8CDD9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lrif1Q8CDD9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrif1Q8CDD9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrif1Q8CDD9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lrif1Q8CDD9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms