Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.08■□□□□ 0.48
Lrtm1Q8BXQ3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lrtm1Q8BXQ3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lrtm1Q8BXQ3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lrtm1Q8BXQ3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lrtm1Q8BXQ3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lrtm1Q8BXQ3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lrtm1Q8BXQ3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrtm1Q8BXQ3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
Lrtm1Q8BXQ3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lrtm1Q8BXQ3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
Lrtm1Q8BXQ3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Lrtm1Q8BXQ3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18■□□□□ 0.47
Lrtm1Q8BXQ3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lrtm1Q8BXQ3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lrtm1Q8BXQ3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms