Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Scfd1Q8BRF7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Scfd1Q8BRF7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scfd1Q8BRF7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Scfd1Q8BRF7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC23.79■■□□□ 1.4
Scfd1Q8BRF7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scfd1Q8BRF7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Scfd1Q8BRF7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Scfd1Q8BRF7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Serp2-204ENSMUST00000228055 705 ntBASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Scfd1Q8BRF7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Scfd1Q8BRF7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Gm43137-201ENSMUST00000198052 594 ntBASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Scfd1Q8BRF7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Scfd1Q8BRF7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC23.73■■□□□ 1.39
Scfd1Q8BRF7 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.73■■□□□ 1.39
Scfd1Q8BRF7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Scfd1Q8BRF7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Scfd1Q8BRF7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Scfd1Q8BRF7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.72■■□□□ 1.39
Scfd1Q8BRF7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.72■■□□□ 1.39
Scfd1Q8BRF7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Scfd1Q8BRF7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Scfd1Q8BRF7 Gm43530-201ENSMUST00000195920 274 ntBASIC23.71■■□□□ 1.39
Scfd1Q8BRF7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Scfd1Q8BRF7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Scfd1Q8BRF7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Scfd1Q8BRF7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Scfd1Q8BRF7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.68■■□□□ 1.38
Scfd1Q8BRF7 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms