Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Gm10399-202ENSMUST00000202768 748 ntBASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trpa1Q8BLA8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trpa1Q8BLA8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpa1Q8BLA8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpa1Q8BLA8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trpa1Q8BLA8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Trpa1Q8BLA8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trpa1Q8BLA8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpa1Q8BLA8 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Gm7417-201ENSMUST00000192950 473 ntBASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trpa1Q8BLA8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.58■■□□□ 1.05
Trpa1Q8BLA8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trpa1Q8BLA8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trpa1Q8BLA8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trpa1Q8BLA8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.57■■□□□ 1.04
Trpa1Q8BLA8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpa1Q8BLA8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpa1Q8BLA8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpa1Q8BLA8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpa1Q8BLA8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpa1Q8BLA8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpa1Q8BLA8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trpa1Q8BLA8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpa1Q8BLA8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpa1Q8BLA8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trpa1Q8BLA8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trpa1Q8BLA8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trpa1Q8BLA8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.52■■□□□ 1.04
Trpa1Q8BLA8 Iqck-206ENSMUST00000208658 2891 ntBASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms