Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Gm43137-201ENSMUST00000198052 594 ntBASIC19.03■□□□□ 0.64
Pif1Q80SX8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Gm6139-201ENSMUST00000079261 882 ntBASIC19.02■□□□□ 0.64
Pif1Q80SX8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pif1Q80SX8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pif1Q80SX8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pif1Q80SX8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pif1Q80SX8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Pif1Q80SX8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pif1Q80SX8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pif1Q80SX8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pif1Q80SX8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pif1Q80SX8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pif1Q80SX8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pif1Q80SX8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pif1Q80SX8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pif1Q80SX8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.98■□□□□ 0.63
Pif1Q80SX8 Gm8495-201ENSMUST00000188740 694 ntBASIC18.98■□□□□ 0.63
Pif1Q80SX8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pif1Q80SX8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pif1Q80SX8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pif1Q80SX8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pif1Q80SX8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.97■□□□□ 0.63
Pif1Q80SX8 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.97■□□□□ 0.63
Pif1Q80SX8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pif1Q80SX8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.96■□□□□ 0.63
Pif1Q80SX8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pif1Q80SX8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pif1Q80SX8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pif1Q80SX8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pif1Q80SX8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pif1Q80SX8 Gm18284-201ENSMUST00000172604 624 ntBASIC18.96■□□□□ 0.63
Pif1Q80SX8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.96■□□□□ 0.63
Pif1Q80SX8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pif1Q80SX8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pif1Q80SX8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pif1Q80SX8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pif1Q80SX8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pif1Q80SX8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms