Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trappc6aQ78XR0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trappc6aQ78XR0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trappc6aQ78XR0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trappc6aQ78XR0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.52■□□□□ 0.88
Trappc6aQ78XR0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.52■□□□□ 0.88
Trappc6aQ78XR0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trappc6aQ78XR0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trappc6aQ78XR0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Trappc6aQ78XR0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trappc6aQ78XR0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trappc6aQ78XR0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trappc6aQ78XR0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trappc6aQ78XR0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trappc6aQ78XR0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trappc6aQ78XR0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trappc6aQ78XR0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Gm5874-201ENSMUST00000096101 508 ntBASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trappc6aQ78XR0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trappc6aQ78XR0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trappc6aQ78XR0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trappc6aQ78XR0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.43■□□□□ 0.86
Trappc6aQ78XR0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trappc6aQ78XR0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trappc6aQ78XR0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms