Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx55Q6ZPL9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx55Q6ZPL9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Gm43530-201ENSMUST00000195920 274 ntBASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Gm10493-201ENSMUST00000097270 612 ntBASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx55Q6ZPL9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ddx55Q6ZPL9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ddx55Q6ZPL9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx55Q6ZPL9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx55Q6ZPL9 Gm43060-201ENSMUST00000200621 289 ntBASIC23.86■■□□□ 1.41
Ddx55Q6ZPL9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx55Q6ZPL9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Ddx55Q6ZPL9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx55Q6ZPL9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx55Q6ZPL9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Gm27405-201ENSMUST00000184201 112 ntBASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx55Q6ZPL9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Gm10849-201ENSMUST00000100397 618 ntBASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx55Q6ZPL9 Gm42569-201ENSMUST00000200539 472 ntBASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx55Q6ZPL9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ddx55Q6ZPL9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx55Q6ZPL9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx55Q6ZPL9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms