Protein–RNA interactions for Protein: Q6PGE7

Slc6a7, Sodium-dependent proline transporter, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a7Q6PGE7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a7Q6PGE7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a7Q6PGE7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Slc6a7Q6PGE7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a7Q6PGE7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc6a7Q6PGE7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc6a7Q6PGE7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc6a7Q6PGE7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc6a7Q6PGE7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Slc6a7Q6PGE7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc6a7Q6PGE7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc6a7Q6PGE7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a7Q6PGE7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a7Q6PGE7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a7Q6PGE7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms