Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scube3Q66PY1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube3Q66PY1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scube3Q66PY1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scube3Q66PY1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Scube3Q66PY1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
Scube3Q66PY1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
Scube3Q66PY1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scube3Q66PY1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.71■■□□□ 1.07
Scube3Q66PY1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.71■■□□□ 1.07
Scube3Q66PY1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.7■■□□□ 1.06
Scube3Q66PY1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.7■■□□□ 1.06
Scube3Q66PY1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Scube3Q66PY1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Scube3Q66PY1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scube3Q66PY1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube3Q66PY1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube3Q66PY1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.68■■□□□ 1.06
Scube3Q66PY1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube3Q66PY1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.68■■□□□ 1.06
Scube3Q66PY1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.68■■□□□ 1.06
Scube3Q66PY1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Scube3Q66PY1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube3Q66PY1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scube3Q66PY1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Scube3Q66PY1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube3Q66PY1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube3Q66PY1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scube3Q66PY1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
Scube3Q66PY1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.64■■□□□ 1.06
Scube3Q66PY1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scube3Q66PY1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube3Q66PY1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.64■■□□□ 1.05
Scube3Q66PY1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scube3Q66PY1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube3Q66PY1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube3Q66PY1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Scube3Q66PY1 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.63■■□□□ 1.05
Scube3Q66PY1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scube3Q66PY1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Scube3Q66PY1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scube3Q66PY1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.62■■□□□ 1.05
Scube3Q66PY1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube3Q66PY1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scube3Q66PY1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scube3Q66PY1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.61■■□□□ 1.05
Scube3Q66PY1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Scube3Q66PY1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.61■■□□□ 1.05
Scube3Q66PY1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Scube3Q66PY1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms