Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
Scarb1Q61009 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scarb1Q61009 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Scarb1Q61009 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.31■□□□□ 0.36
Scarb1Q61009 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scarb1Q61009 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.3■□□□□ 0.36
Scarb1Q61009 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Scarb1Q61009 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.3■□□□□ 0.36
Scarb1Q61009 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.3■□□□□ 0.36
Scarb1Q61009 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scarb1Q61009 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scarb1Q61009 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Scarb1Q61009 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Scarb1Q61009 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scarb1Q61009 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.29■□□□□ 0.36
Scarb1Q61009 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Scarb1Q61009 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scarb1Q61009 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.28■□□□□ 0.36
Scarb1Q61009 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.28■□□□□ 0.36
Scarb1Q61009 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.28■□□□□ 0.36
Scarb1Q61009 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scarb1Q61009 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scarb1Q61009 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Scarb1Q61009 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Scarb1Q61009 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scarb1Q61009 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scarb1Q61009 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.26■□□□□ 0.35
Scarb1Q61009 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Scarb1Q61009 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scarb1Q61009 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.25■□□□□ 0.35
Scarb1Q61009 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scarb1Q61009 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scarb1Q61009 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scarb1Q61009 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scarb1Q61009 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.24■□□□□ 0.35
Scarb1Q61009 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scarb1Q61009 Scarna2-201ENSMUST00000157560 414 ntBASIC17.24■□□□□ 0.35
Scarb1Q61009 Gm16437-201ENSMUST00000025669 507 ntBASIC17.24■□□□□ 0.35
Scarb1Q61009 Gm9806-201ENSMUST00000051080 552 ntBASIC17.24■□□□□ 0.35
Scarb1Q61009 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scarb1Q61009 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scarb1Q61009 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scarb1Q61009 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scarb1Q61009 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Scarb1Q61009 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scarb1Q61009 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.22■□□□□ 0.35
Scarb1Q61009 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scarb1Q61009 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms