Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7d-3Q5R1I1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7d-3Q5R1I1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7d-3Q5R1I1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav7d-3Q5R1I1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7d-3Q5R1I1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav7d-3Q5R1I1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav7d-3Q5R1I1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav7d-3Q5R1I1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7d-3Q5R1I1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Trav7d-3Q5R1I1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-3Q5R1I1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
Trav7d-3Q5R1I1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav7d-3Q5R1I1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7d-3Q5R1I1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav7d-3Q5R1I1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-3Q5R1I1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-3Q5R1I1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.04■□□□□ -0
Trav7d-3Q5R1I1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7d-3Q5R1I1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7d-3Q5R1I1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav7d-3Q5R1I1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7d-3Q5R1I1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7d-3Q5R1I1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7d-3Q5R1I1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7d-3Q5R1I1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms