Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.41■■□□□ 1.18
R3hdm4Q4VBF2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
R3hdm4Q4VBF2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
R3hdm4Q4VBF2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
R3hdm4Q4VBF2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
R3hdm4Q4VBF2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
R3hdm4Q4VBF2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
R3hdm4Q4VBF2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
R3hdm4Q4VBF2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
R3hdm4Q4VBF2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
R3hdm4Q4VBF2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
R3hdm4Q4VBF2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
R3hdm4Q4VBF2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
R3hdm4Q4VBF2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.37■■□□□ 1.17
R3hdm4Q4VBF2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
R3hdm4Q4VBF2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
R3hdm4Q4VBF2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
R3hdm4Q4VBF2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
R3hdm4Q4VBF2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
R3hdm4Q4VBF2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
R3hdm4Q4VBF2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
R3hdm4Q4VBF2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
R3hdm4Q4VBF2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
R3hdm4Q4VBF2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.33■■□□□ 1.17
R3hdm4Q4VBF2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
R3hdm4Q4VBF2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
R3hdm4Q4VBF2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
R3hdm4Q4VBF2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
R3hdm4Q4VBF2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
R3hdm4Q4VBF2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.3■■□□□ 1.16
R3hdm4Q4VBF2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3hdm4Q4VBF2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
R3hdm4Q4VBF2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
R3hdm4Q4VBF2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3hdm4Q4VBF2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.28■■□□□ 1.16
R3hdm4Q4VBF2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3hdm4Q4VBF2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
R3hdm4Q4VBF2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3hdm4Q4VBF2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3hdm4Q4VBF2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.27■■□□□ 1.16
R3hdm4Q4VBF2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3hdm4Q4VBF2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
R3hdm4Q4VBF2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
R3hdm4Q4VBF2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms