Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Uspl1Q3ULM6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Uspl1Q3ULM6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.96■■□□□ 1.91
Uspl1Q3ULM6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
Uspl1Q3ULM6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
Uspl1Q3ULM6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
Uspl1Q3ULM6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Uspl1Q3ULM6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Uspl1Q3ULM6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Uspl1Q3ULM6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Uspl1Q3ULM6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Uspl1Q3ULM6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26.94■■□□□ 1.9
Uspl1Q3ULM6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Uspl1Q3ULM6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Uspl1Q3ULM6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Uspl1Q3ULM6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Uspl1Q3ULM6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Uspl1Q3ULM6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Uspl1Q3ULM6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Uspl1Q3ULM6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Uspl1Q3ULM6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Uspl1Q3ULM6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Uspl1Q3ULM6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Uspl1Q3ULM6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Uspl1Q3ULM6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Uspl1Q3ULM6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Gm7143-201ENSMUST00000222811 859 ntBASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Uspl1Q3ULM6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.9
Uspl1Q3ULM6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Uspl1Q3ULM6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Uspl1Q3ULM6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Uspl1Q3ULM6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
Uspl1Q3ULM6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Uspl1Q3ULM6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Uspl1Q3ULM6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Uspl1Q3ULM6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Uspl1Q3ULM6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Uspl1Q3ULM6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.85■■□□□ 1.89
Uspl1Q3ULM6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Uspl1Q3ULM6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC26.85■■□□□ 1.89
Uspl1Q3ULM6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Uspl1Q3ULM6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 Gm6277-202ENSMUST00000224036 2779 ntBASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Uspl1Q3ULM6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Uspl1Q3ULM6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Uspl1Q3ULM6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Uspl1Q3ULM6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Uspl1Q3ULM6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Uspl1Q3ULM6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Uspl1Q3ULM6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Uspl1Q3ULM6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 414.8 ms