Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col10a1Q05306 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col10a1Q05306 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col10a1Q05306 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Col10a1Q05306 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col10a1Q05306 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col10a1Q05306 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.02■□□□□ 0.64
Col10a1Q05306 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Col10a1Q05306 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col10a1Q05306 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.02■□□□□ 0.63
Col10a1Q05306 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.01■□□□□ 0.63
Col10a1Q05306 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col10a1Q05306 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.01■□□□□ 0.63
Col10a1Q05306 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col10a1Q05306 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.01■□□□□ 0.63
Col10a1Q05306 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.01■□□□□ 0.63
Col10a1Q05306 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19■□□□□ 0.63
Col10a1Q05306 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19■□□□□ 0.63
Col10a1Q05306 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col10a1Q05306 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col10a1Q05306 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col10a1Q05306 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col10a1Q05306 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.99■□□□□ 0.63
Col10a1Q05306 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.99■□□□□ 0.63
Col10a1Q05306 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col10a1Q05306 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col10a1Q05306 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col10a1Q05306 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col10a1Q05306 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Col10a1Q05306 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col10a1Q05306 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col10a1Q05306 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.97■□□□□ 0.63
Col10a1Q05306 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col10a1Q05306 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col10a1Q05306 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.96■□□□□ 0.63
Col10a1Q05306 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.96■□□□□ 0.63
Col10a1Q05306 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col10a1Q05306 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.95■□□□□ 0.62
Col10a1Q05306 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col10a1Q05306 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col10a1Q05306 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col10a1Q05306 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.95■□□□□ 0.62
Col10a1Q05306 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col10a1Q05306 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.94■□□□□ 0.62
Col10a1Q05306 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col10a1Q05306 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col10a1Q05306 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col10a1Q05306 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col10a1Q05306 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.93■□□□□ 0.62
Col10a1Q05306 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms