Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six5P70178 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six5P70178 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six5P70178 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.32■□□□□ 0.68
Six5P70178 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six5P70178 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.32■□□□□ 0.68
Six5P70178 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
Six5P70178 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.31■□□□□ 0.68
Six5P70178 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six5P70178 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Six5P70178 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Six5P70178 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Six5P70178 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six5P70178 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Six5P70178 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.29■□□□□ 0.68
Six5P70178 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Six5P70178 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Six5P70178 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.28■□□□□ 0.68
Six5P70178 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Six5P70178 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Six5P70178 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six5P70178 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six5P70178 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.27■□□□□ 0.68
Six5P70178 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six5P70178 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Six5P70178 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.27■□□□□ 0.68
Six5P70178 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Six5P70178 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.27■□□□□ 0.67
Six5P70178 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Six5P70178 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six5P70178 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Six5P70178 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Six5P70178 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.26■□□□□ 0.67
Six5P70178 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.26■□□□□ 0.67
Six5P70178 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six5P70178 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.26■□□□□ 0.67
Six5P70178 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Six5P70178 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Six5P70178 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.25■□□□□ 0.67
Six5P70178 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six5P70178 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.25■□□□□ 0.67
Six5P70178 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six5P70178 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.25■□□□□ 0.67
Six5P70178 Gm7417-201ENSMUST00000192950 473 ntBASIC19.25■□□□□ 0.67
Six5P70178 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Six5P70178 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.25■□□□□ 0.67
Six5P70178 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
Six5P70178 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.24■□□□□ 0.67
Six5P70178 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Six5P70178 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms