Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdh11P55288 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdh11P55288 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cdh11P55288 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdh11P55288 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cdh11P55288 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdh11P55288 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.67■□□□□ 0.58
Cdh11P55288 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh11P55288 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdh11P55288 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdh11P55288 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.67■□□□□ 0.58
Cdh11P55288 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh11P55288 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh11P55288 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh11P55288 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh11P55288 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdh11P55288 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cdh11P55288 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh11P55288 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh11P55288 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh11P55288 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdh11P55288 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh11P55288 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdh11P55288 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdh11P55288 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdh11P55288 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdh11P55288 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdh11P55288 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cdh11P55288 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.65■□□□□ 0.58
Cdh11P55288 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdh11P55288 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdh11P55288 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cdh11P55288 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh11P55288 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.64■□□□□ 0.57
Cdh11P55288 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh11P55288 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdh11P55288 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cdh11P55288 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdh11P55288 Rps24-207ENSMUST00000224568 714 ntBASIC18.63■□□□□ 0.57
Cdh11P55288 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdh11P55288 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Cdh11P55288 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdh11P55288 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdh11P55288 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.62■□□□□ 0.57
Cdh11P55288 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Cdh11P55288 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdh11P55288 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cdh11P55288 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.61■□□□□ 0.57
Cdh11P55288 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdh11P55288 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdh11P55288 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh11P55288 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdh11P55288 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cdh11P55288 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms