Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Srp9P49962 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.44■□□□□ 0.38
Srp9P49962 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Srp9P49962 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Srp9P49962 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.44■□□□□ 0.38
Srp9P49962 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srp9P49962 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Srp9P49962 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Srp9P49962 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Srp9P49962 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.43■□□□□ 0.38
Srp9P49962 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Srp9P49962 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srp9P49962 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Srp9P49962 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Srp9P49962 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srp9P49962 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Srp9P49962 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.41■□□□□ 0.38
Srp9P49962 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Srp9P49962 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Srp9P49962 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.41■□□□□ 0.38
Srp9P49962 Cap2-205ENSMUST00000225824 1634 ntBASIC17.4■□□□□ 0.38
Srp9P49962 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.4■□□□□ 0.38
Srp9P49962 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Srp9P49962 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Srp9P49962 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.4■□□□□ 0.38
Srp9P49962 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srp9P49962 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srp9P49962 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Srp9P49962 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Srp9P49962 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Srp9P49962 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.39■□□□□ 0.37
Srp9P49962 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp9P49962 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.39■□□□□ 0.37
Srp9P49962 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.38■□□□□ 0.37
Srp9P49962 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.38■□□□□ 0.37
Srp9P49962 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp9P49962 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Srp9P49962 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Srp9P49962 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp9P49962 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.37■□□□□ 0.37
Srp9P49962 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.37■□□□□ 0.37
Srp9P49962 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp9P49962 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srp9P49962 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Srp9P49962 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp9P49962 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp9P49962 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.36■□□□□ 0.37
Srp9P49962 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp9P49962 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.36■□□□□ 0.37
Srp9P49962 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.36■□□□□ 0.37
Srp9P49962 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Srp9P49962 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp9P49962 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.36■□□□□ 0.37
Srp9P49962 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Srp9P49962 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp9P49962 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp9P49962 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms