Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RetP35546 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RetP35546 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RetP35546 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.29■□□□□ 0.68
RetP35546 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RetP35546 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RetP35546 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.28■□□□□ 0.68
RetP35546 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RetP35546 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.27■□□□□ 0.68
RetP35546 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 Gm12922-201ENSMUST00000120626 809 ntBASIC19.27■□□□□ 0.68
RetP35546 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.27■□□□□ 0.68
RetP35546 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RetP35546 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.26■□□□□ 0.67
RetP35546 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RetP35546 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.26■□□□□ 0.67
RetP35546 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RetP35546 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RetP35546 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.26■□□□□ 0.67
RetP35546 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RetP35546 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.26■□□□□ 0.67
RetP35546 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.26■□□□□ 0.67
RetP35546 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RetP35546 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RetP35546 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.26■□□□□ 0.67
RetP35546 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RetP35546 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RetP35546 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RetP35546 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RetP35546 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RetP35546 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RetP35546 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
RetP35546 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Gm12821-201ENSMUST00000120022 600 ntBASIC19.24■□□□□ 0.67
RetP35546 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.24■□□□□ 0.67
RetP35546 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.24■□□□□ 0.67
RetP35546 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RetP35546 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.24■□□□□ 0.67
RetP35546 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RetP35546 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RetP35546 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.23■□□□□ 0.67
RetP35546 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RetP35546 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RetP35546 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RetP35546 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.22■□□□□ 0.67
RetP35546 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RetP35546 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
RetP35546 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RetP35546 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.21■□□□□ 0.67
RetP35546 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RetP35546 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RetP35546 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
RetP35546 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RetP35546 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.2■□□□□ 0.66
RetP35546 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RetP35546 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RetP35546 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms