Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfrsf1aP25118 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfrsf1aP25118 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Gm45444-201ENSMUST00000211394 898 ntBASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfrsf1aP25118 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf1aP25118 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf1aP25118 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf1aP25118 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf1aP25118 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tnfrsf1aP25118 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf1aP25118 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf1aP25118 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Gm5921-201ENSMUST00000075898 882 ntBASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf1aP25118 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf1aP25118 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms