Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.1■□□□□ 0.17
P04944 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
P04944 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
P04944 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.09■□□□□ 0.17
P04944 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.09■□□□□ 0.17
P04944 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.09■□□□□ 0.17
P04944 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Gm43566-201ENSMUST00000196851 808 ntBASIC16.09■□□□□ 0.17
P04944 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
P04944 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
P04944 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
P04944 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
P04944 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.08■□□□□ 0.16
P04944 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
P04944 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04944 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.07■□□□□ 0.16
P04944 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.07■□□□□ 0.16
P04944 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04944 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
P04944 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
P04944 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.07■□□□□ 0.16
P04944 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.06■□□□□ 0.16
P04944 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
P04944 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
P04944 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
P04944 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
P04944 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.06■□□□□ 0.16
P04944 Gm5921-201ENSMUST00000075898 882 ntBASIC16.06■□□□□ 0.16
P04944 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
P04944 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
P04944 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
P04944 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04944 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04944 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04944 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
P04944 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
P04944 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.05■□□□□ 0.16
P04944 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04944 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
P04944 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
P04944 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
P04944 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Gm13238-201ENSMUST00000117655 780 ntBASIC16.04■□□□□ 0.16
P04944 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.04■□□□□ 0.16
P04944 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
P04944 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.03■□□□□ 0.16
P04944 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
P04944 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.03■□□□□ 0.16
P04944 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P04944 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
P04944 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.03■□□□□ 0.16
P04944 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
P04944 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
P04944 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
P04944 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms