Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Cd74P04441 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd74P04441 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd74P04441 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd74P04441 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd74P04441 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cd74P04441 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Cd74P04441 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd74P04441 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.21■□□□□ 0.35
Cd74P04441 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cd74P04441 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cd74P04441 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.2■□□□□ 0.34
Cd74P04441 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd74P04441 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.19■□□□□ 0.34
Cd74P04441 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.19■□□□□ 0.34
Cd74P04441 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.19■□□□□ 0.34
Cd74P04441 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.19■□□□□ 0.34
Cd74P04441 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.19■□□□□ 0.34
Cd74P04441 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd74P04441 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd74P04441 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Gm15039-201ENSMUST00000118914 875 ntBASIC17.18■□□□□ 0.34
Cd74P04441 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.18■□□□□ 0.34
Cd74P04441 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.18■□□□□ 0.34
Cd74P04441 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Cd74P04441 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd74P04441 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.17■□□□□ 0.34
Cd74P04441 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.17■□□□□ 0.34
Cd74P04441 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cd74P04441 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd74P04441 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd74P04441 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd74P04441 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd74P04441 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd74P04441 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cd74P04441 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.16■□□□□ 0.34
Cd74P04441 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd74P04441 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.16■□□□□ 0.34
Cd74P04441 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cd74P04441 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.15■□□□□ 0.34
Cd74P04441 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd74P04441 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cd74P04441 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd74P04441 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd74P04441 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Cd74P04441 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cd74P04441 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cd74P04441 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd74P04441 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd74P04441 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.13■□□□□ 0.33
Cd74P04441 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd74P04441 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd74P04441 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd74P04441 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cd74P04441 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Cd74P04441 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.12■□□□□ 0.33
Cd74P04441 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd74P04441 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms