Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Cdh16O88338 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdh16O88338 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.16■□□□□ 0.82
Cdh16O88338 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdh16O88338 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh16O88338 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh16O88338 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh16O88338 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cdh16O88338 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh16O88338 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdh16O88338 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh16O88338 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh16O88338 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdh16O88338 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh16O88338 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cdh16O88338 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdh16O88338 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cdh16O88338 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh16O88338 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.13■□□□□ 0.81
Cdh16O88338 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh16O88338 Gm11687-201ENSMUST00000118911 886 ntBASIC20.13■□□□□ 0.81
Cdh16O88338 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh16O88338 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdh16O88338 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdh16O88338 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cdh16O88338 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh16O88338 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh16O88338 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh16O88338 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh16O88338 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdh16O88338 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cdh16O88338 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.11■□□□□ 0.81
Cdh16O88338 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh16O88338 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdh16O88338 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.11■□□□□ 0.81
Cdh16O88338 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cdh16O88338 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.11■□□□□ 0.81
Cdh16O88338 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdh16O88338 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cdh16O88338 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdh16O88338 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdh16O88338 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdh16O88338 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdh16O88338 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh16O88338 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh16O88338 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh16O88338 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdh16O88338 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cdh16O88338 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh16O88338 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh16O88338 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cdh16O88338 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh16O88338 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.08■□□□□ 0.81
Cdh16O88338 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdh16O88338 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.08■□□□□ 0.81
Cdh16O88338 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.08■□□□□ 0.8
Cdh16O88338 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.08■□□□□ 0.8
Cdh16O88338 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh16O88338 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh16O88338 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdh16O88338 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cdh16O88338 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
Cdh16O88338 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh16O88338 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cdh16O88338 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdh16O88338 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.07■□□□□ 0.8
Cdh16O88338 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Cdh16O88338 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdh16O88338 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cdh16O88338 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Cdh16O88338 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms