Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Mmp8O70138 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Mmp8O70138 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Mmp8O70138 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Mmp8O70138 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.41■■□□□ 1.66
Mmp8O70138 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Mmp8O70138 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Mmp8O70138 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Mmp8O70138 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Mmp8O70138 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Mmp8O70138 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC25.4■■□□□ 1.66
Mmp8O70138 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.4■■□□□ 1.66
Mmp8O70138 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Mmp8O70138 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Mmp8O70138 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Mmp8O70138 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Mmp8O70138 Gm22238-201ENSMUST00000175222 88 ntBASIC25.39■■□□□ 1.66
Mmp8O70138 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Mmp8O70138 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Mmp8O70138 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Mmp8O70138 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Mmp8O70138 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.38■■□□□ 1.65
Mmp8O70138 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Mmp8O70138 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.37■■□□□ 1.65
Mmp8O70138 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Mmp8O70138 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Mmp8O70138 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Mmp8O70138 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.36■■□□□ 1.65
Mmp8O70138 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Mmp8O70138 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Mmp8O70138 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC25.36■■□□□ 1.65
Mmp8O70138 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.35■■□□□ 1.65
Mmp8O70138 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Mmp8O70138 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Mmp8O70138 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Mmp8O70138 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Mmp8O70138 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Mmp8O70138 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Mmp8O70138 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Mmp8O70138 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Mmp8O70138 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Mmp8O70138 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.33■■□□□ 1.65
Mmp8O70138 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Mmp8O70138 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Mmp8O70138 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Mmp8O70138 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp8O70138 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.31■■□□□ 1.64
Mmp8O70138 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp8O70138 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.31■■□□□ 1.64
Mmp8O70138 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp8O70138 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
Mmp8O70138 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Mmp8O70138 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Mmp8O70138 Gm7143-201ENSMUST00000222811 859 ntBASIC25.3■■□□□ 1.64
Mmp8O70138 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.3■■□□□ 1.64
Mmp8O70138 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Mmp8O70138 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp8O70138 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp8O70138 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC25.29■■□□□ 1.64
Mmp8O70138 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp8O70138 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Mmp8O70138 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp8O70138 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Mmp8O70138 Gm6277-202ENSMUST00000224036 2779 ntBASIC25.29■■□□□ 1.64
Mmp8O70138 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC25.28■■□□□ 1.64
Mmp8O70138 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC25.28■■□□□ 1.64
Mmp8O70138 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp8O70138 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp8O70138 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
Mmp8O70138 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp8O70138 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Mmp8O70138 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp8O70138 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp8O70138 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp8O70138 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Mmp8O70138 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.27■■□□□ 1.64
Mmp8O70138 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms