Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BckdkO55028 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.08■□□□□ 0.65
BckdkO55028 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
BckdkO55028 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BckdkO55028 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BckdkO55028 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BckdkO55028 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.08■□□□□ 0.64
BckdkO55028 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BckdkO55028 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BckdkO55028 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BckdkO55028 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BckdkO55028 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BckdkO55028 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BckdkO55028 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BckdkO55028 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BckdkO55028 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
BckdkO55028 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.06■□□□□ 0.64
BckdkO55028 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 Gm10399-202ENSMUST00000202768 748 ntBASIC19.06■□□□□ 0.64
BckdkO55028 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.06■□□□□ 0.64
BckdkO55028 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BckdkO55028 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.06■□□□□ 0.64
BckdkO55028 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
BckdkO55028 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
BckdkO55028 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.05■□□□□ 0.64
BckdkO55028 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.05■□□□□ 0.64
BckdkO55028 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.05■□□□□ 0.64
BckdkO55028 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BckdkO55028 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.04■□□□□ 0.64
BckdkO55028 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.04■□□□□ 0.64
BckdkO55028 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BckdkO55028 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BckdkO55028 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BckdkO55028 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BckdkO55028 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
BckdkO55028 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
BckdkO55028 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
BckdkO55028 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BckdkO55028 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.02■□□□□ 0.64
BckdkO55028 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.02■□□□□ 0.64
BckdkO55028 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.02■□□□□ 0.64
BckdkO55028 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BckdkO55028 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
BckdkO55028 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BckdkO55028 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BckdkO55028 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.01■□□□□ 0.63
BckdkO55028 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19■□□□□ 0.63
BckdkO55028 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19■□□□□ 0.63
BckdkO55028 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19■□□□□ 0.63
BckdkO55028 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BckdkO55028 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BckdkO55028 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BckdkO55028 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BckdkO55028 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BckdkO55028 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.99■□□□□ 0.63
BckdkO55028 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BckdkO55028 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.99■□□□□ 0.63
BckdkO55028 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.99■□□□□ 0.63
BckdkO55028 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BckdkO55028 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
BckdkO55028 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BckdkO55028 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BckdkO55028 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.98■□□□□ 0.63
BckdkO55028 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BckdkO55028 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
BckdkO55028 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
BckdkO55028 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BckdkO55028 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms