Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Dkk1O54908 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dkk1O54908 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.85■□□□□ 0.45
Dkk1O54908 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.85■□□□□ 0.45
Dkk1O54908 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.85■□□□□ 0.45
Dkk1O54908 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.85■□□□□ 0.45
Dkk1O54908 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Dkk1O54908 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dkk1O54908 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.84■□□□□ 0.45
Dkk1O54908 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.84■□□□□ 0.45
Dkk1O54908 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dkk1O54908 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.84■□□□□ 0.45
Dkk1O54908 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Dkk1O54908 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dkk1O54908 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dkk1O54908 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.83■□□□□ 0.44
Dkk1O54908 AC132260.2-201ENSMUST00000224482 344 ntBASIC17.83■□□□□ 0.44
Dkk1O54908 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.83■□□□□ 0.44
Dkk1O54908 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dkk1O54908 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.83■□□□□ 0.44
Dkk1O54908 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dkk1O54908 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Etf1-202ENSMUST00000180351 108 ntBASIC17.82■□□□□ 0.44
Dkk1O54908 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.82■□□□□ 0.44
Dkk1O54908 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC17.82■□□□□ 0.44
Dkk1O54908 Rps24-207ENSMUST00000224568 714 ntBASIC17.82■□□□□ 0.44
Dkk1O54908 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dkk1O54908 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dkk1O54908 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dkk1O54908 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Dkk1O54908 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.81■□□□□ 0.44
Dkk1O54908 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.81■□□□□ 0.44
Dkk1O54908 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Dkk1O54908 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.81■□□□□ 0.44
Dkk1O54908 Gm7417-201ENSMUST00000192950 473 ntBASIC17.81■□□□□ 0.44
Dkk1O54908 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.81■□□□□ 0.44
Dkk1O54908 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Dkk1O54908 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Dkk1O54908 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC17.81■□□□□ 0.44
Dkk1O54908 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Dkk1O54908 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Dkk1O54908 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Gm14117-201ENSMUST00000122417 843 ntBASIC17.8■□□□□ 0.44
Dkk1O54908 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Dkk1O54908 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Dkk1O54908 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.79■□□□□ 0.44
Dkk1O54908 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Dkk1O54908 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.79■□□□□ 0.44
Dkk1O54908 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.79■□□□□ 0.44
Dkk1O54908 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dkk1O54908 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.78■□□□□ 0.44
Dkk1O54908 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.78■□□□□ 0.44
Dkk1O54908 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dkk1O54908 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dkk1O54908 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dkk1O54908 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dkk1O54908 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dkk1O54908 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms