Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a5A6H584 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a5A6H584 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a5A6H584 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a5A6H584 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Col6a5A6H584 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col6a5A6H584 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.01■□□□□ 0.15
Col6a5A6H584 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a5A6H584 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a5A6H584 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col6a5A6H584 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Col6a5A6H584 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Gm4968-201ENSMUST00000071458 858 ntBASIC16■□□□□ 0.15
Col6a5A6H584 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col6a5A6H584 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16■□□□□ 0.15
Col6a5A6H584 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16■□□□□ 0.15
Col6a5A6H584 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col6a5A6H584 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.99■□□□□ 0.15
Col6a5A6H584 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.99■□□□□ 0.15
Col6a5A6H584 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Gm8520-201ENSMUST00000186517 868 ntBASIC15.99■□□□□ 0.15
Col6a5A6H584 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Col6a5A6H584 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.99■□□□□ 0.15
Col6a5A6H584 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col6a5A6H584 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col6a5A6H584 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.98■□□□□ 0.15
Col6a5A6H584 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col6a5A6H584 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col6a5A6H584 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col6a5A6H584 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col6a5A6H584 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.98■□□□□ 0.15
Col6a5A6H584 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.98■□□□□ 0.15
Col6a5A6H584 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Col6a5A6H584 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col6a5A6H584 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col6a5A6H584 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col6a5A6H584 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.97■□□□□ 0.15
Col6a5A6H584 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.97■□□□□ 0.15
Col6a5A6H584 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.97■□□□□ 0.15
Col6a5A6H584 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.97■□□□□ 0.15
Col6a5A6H584 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col6a5A6H584 Mir6982-201ENSMUST00000184354 68 ntBASIC15.97■□□□□ 0.15
Col6a5A6H584 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a5A6H584 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.96■□□□□ 0.15
Col6a5A6H584 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.96■□□□□ 0.15
Col6a5A6H584 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.96■□□□□ 0.15
Col6a5A6H584 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a5A6H584 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a5A6H584 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.96■□□□□ 0.15
Col6a5A6H584 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col6a5A6H584 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
Col6a5A6H584 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Col6a5A6H584 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a5A6H584 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.95■□□□□ 0.14
Col6a5A6H584 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col6a5A6H584 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.95■□□□□ 0.14
Col6a5A6H584 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col6a5A6H584 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col6a5A6H584 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.95■□□□□ 0.14
Col6a5A6H584 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a5A6H584 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a5A6H584 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
Col6a5A6H584 Gm13148-201ENSMUST00000118892 745 ntBASIC15.94■□□□□ 0.14
Col6a5A6H584 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a5A6H584 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.94■□□□□ 0.14
Col6a5A6H584 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col6a5A6H584 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.93■□□□□ 0.14
Col6a5A6H584 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a5A6H584 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a5A6H584 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Col6a5A6H584 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Col6a5A6H584 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a5A6H584 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col6a5A6H584 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col6a5A6H584 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col6a5A6H584 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a5A6H584 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a5A6H584 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.91■□□□□ 0.14
Col6a5A6H584 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a5A6H584 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col6a5A6H584 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col6a5A6H584 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Col6a5A6H584 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a5A6H584 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.9■□□□□ 0.14
Col6a5A6H584 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Col6a5A6H584 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.9■□□□□ 0.14
Col6a5A6H584 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms