Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smim17A0A504 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Smim17A0A504 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smim17A0A504 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Smim17A0A504 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smim17A0A504 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Smim17A0A504 Nkain2-201ENSMUST00000092602 558 ntBASIC18.66■□□□□ 0.58
Smim17A0A504 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smim17A0A504 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smim17A0A504 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim17A0A504 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smim17A0A504 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.65■□□□□ 0.58
Smim17A0A504 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smim17A0A504 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Smim17A0A504 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Smim17A0A504 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.64■□□□□ 0.58
Smim17A0A504 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smim17A0A504 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smim17A0A504 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.64■□□□□ 0.57
Smim17A0A504 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smim17A0A504 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smim17A0A504 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Smim17A0A504 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim17A0A504 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim17A0A504 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smim17A0A504 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smim17A0A504 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Smim17A0A504 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim17A0A504 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smim17A0A504 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.62■□□□□ 0.57
Smim17A0A504 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smim17A0A504 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smim17A0A504 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.61■□□□□ 0.57
Smim17A0A504 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.61■□□□□ 0.57
Smim17A0A504 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
Smim17A0A504 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smim17A0A504 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim17A0A504 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim17A0A504 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smim17A0A504 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Smim17A0A504 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim17A0A504 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smim17A0A504 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.59■□□□□ 0.57
Smim17A0A504 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.59■□□□□ 0.57
Smim17A0A504 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smim17A0A504 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smim17A0A504 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smim17A0A504 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smim17A0A504 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms