Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trbv17A0A140T8P8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv17A0A140T8P8 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.77■□□□□ 0.11
Trbv17A0A140T8P8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trbv17A0A140T8P8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv17A0A140T8P8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Gm15820-201ENSMUST00000201566 728 ntBASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv17A0A140T8P8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Gm10232-201ENSMUST00000089221 720 ntBASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv17A0A140T8P8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.74■□□□□ 0.11
Trbv17A0A140T8P8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv17A0A140T8P8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv17A0A140T8P8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv17A0A140T8P8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trbv17A0A140T8P8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trbv17A0A140T8P8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv17A0A140T8P8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Gm13042-201ENSMUST00000119244 1955 ntBASIC15.69■□□□□ 0.1
Trbv17A0A140T8P8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms