Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Notumos-201ENSMUST00000151998 2659 ntBASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.09■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms