Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-2A0A0G2JF93 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm4799-201ENSMUST00000095396 657 ntBASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav13n-2A0A0G2JF93 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm43403-201ENSMUST00000198011 1786 ntBASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13n-2A0A0G2JF93 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav13n-2A0A0G2JF93 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav13n-2A0A0G2JF93 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trav13n-2A0A0G2JF93 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav13n-2A0A0G2JF93 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13n-2A0A0G2JF93 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13n-2A0A0G2JF93 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13n-2A0A0G2JF93 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms