Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6n-5A0A075B621 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav6n-5A0A075B621 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav6n-5A0A075B621 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav6n-5A0A075B621 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Gm44428-201ENSMUST00000204474 874 ntBASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6n-5A0A075B621 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6n-5A0A075B621 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6n-5A0A075B621 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Trav6n-5A0A075B621 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6n-5A0A075B621 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6n-5A0A075B621 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6n-5A0A075B621 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms