Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ube4bQ9ES00 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4bQ9ES00 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4bQ9ES00 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.81■□□□□ 0.76
Ube4bQ9ES00 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4bQ9ES00 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ube4bQ9ES00 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Mir3960-201ENSMUST00000198213 73 ntBASIC19.8■□□□□ 0.76
Ube4bQ9ES00 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ube4bQ9ES00 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Gm9812-201ENSMUST00000061934 968 ntBASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ube4bQ9ES00 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4bQ9ES00 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4bQ9ES00 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.78■□□□□ 0.76
Ube4bQ9ES00 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Ube4bQ9ES00 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4bQ9ES00 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ube4bQ9ES00 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.77■□□□□ 0.76
Ube4bQ9ES00 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ube4bQ9ES00 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4bQ9ES00 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ube4bQ9ES00 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ube4bQ9ES00 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ube4bQ9ES00 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.76■□□□□ 0.75
Ube4bQ9ES00 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ube4bQ9ES00 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ube4bQ9ES00 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Ube4bQ9ES00 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ube4bQ9ES00 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ube4bQ9ES00 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ube4bQ9ES00 Gm45364-201ENSMUST00000210883 159 ntBASIC19.7■□□□□ 0.74
Ube4bQ9ES00 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.7■□□□□ 0.74
Ube4bQ9ES00 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms