Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.98■□□□□ 0.95
Sf3a3Q9D554 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Sf3a3Q9D554 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sf3a3Q9D554 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a3Q9D554 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Sf3a3Q9D554 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sf3a3Q9D554 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.96■□□□□ 0.95
Sf3a3Q9D554 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.95
Sf3a3Q9D554 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.95
Sf3a3Q9D554 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a3Q9D554 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a3Q9D554 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.95■□□□□ 0.94
Sf3a3Q9D554 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sf3a3Q9D554 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sf3a3Q9D554 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sf3a3Q9D554 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sf3a3Q9D554 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sf3a3Q9D554 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sf3a3Q9D554 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a3Q9D554 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a3Q9D554 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a3Q9D554 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sf3a3Q9D554 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3a3Q9D554 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Gm6821-201ENSMUST00000107540 542 ntBASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Mir3960-201ENSMUST00000198213 73 ntBASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3a3Q9D554 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a3Q9D554 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a3Q9D554 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3a3Q9D554 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a3Q9D554 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.89■□□□□ 0.93
Sf3a3Q9D554 Gm45364-201ENSMUST00000210883 159 ntBASIC20.89■□□□□ 0.93
Sf3a3Q9D554 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a3Q9D554 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3a3Q9D554 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.88■□□□□ 0.93
Sf3a3Q9D554 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
Sf3a3Q9D554 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a3Q9D554 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a3Q9D554 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a3Q9D554 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Sf3a3Q9D554 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Sf3a3Q9D554 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a3Q9D554 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sf3a3Q9D554 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a3Q9D554 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a3Q9D554 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a3Q9D554 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sf3a3Q9D554 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a3Q9D554 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sf3a3Q9D554 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a3Q9D554 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 649.1 ms