Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q9CR55 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q9CR55 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
Q9CR55 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.04■□□□□ 0.64
Q9CR55 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Q9CR55 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Q9CR55 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q9CR55 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Q9CR55 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Q9CR55 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Q9CR55 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
Q9CR55 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Q9CR55 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q9CR55 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.02■□□□□ 0.63
Q9CR55 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Q9CR55 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.02■□□□□ 0.63
Q9CR55 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Q9CR55 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Gm4419-202ENSMUST00000226239 1431 ntBASIC19■□□□□ 0.63
Q9CR55 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19■□□□□ 0.63
Q9CR55 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19■□□□□ 0.63
Q9CR55 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Gm42418-201ENSMUST00000182010 1831 ntBASIC19■□□□□ 0.63
Q9CR55 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Q9CR55 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Q9CR55 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.99■□□□□ 0.63
Q9CR55 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.99■□□□□ 0.63
Q9CR55 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q9CR55 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
Q9CR55 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.98■□□□□ 0.63
Q9CR55 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Q9CR55 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Q9CR55 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.98■□□□□ 0.63
Q9CR55 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q9CR55 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Q9CR55 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Q9CR55 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.97■□□□□ 0.63
Q9CR55 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.97■□□□□ 0.63
Q9CR55 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q9CR55 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Q9CR55 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9CR55 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9CR55 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9CR55 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.96■□□□□ 0.63
Q9CR55 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q9CR55 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9CR55 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q9CR55 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q9CR55 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.95■□□□□ 0.62
Q9CR55 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Q9CR55 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms