Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ska1Q9CPV1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ska1Q9CPV1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ska1Q9CPV1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.46■□□□□ 0.71
Ska1Q9CPV1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ska1Q9CPV1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Ska1Q9CPV1 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ska1Q9CPV1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ska1Q9CPV1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ska1Q9CPV1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ska1Q9CPV1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ska1Q9CPV1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Ska1Q9CPV1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska1Q9CPV1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ska1Q9CPV1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska1Q9CPV1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ska1Q9CPV1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ska1Q9CPV1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ska1Q9CPV1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms