Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lysmd3Q99LE3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lysmd3Q99LE3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lysmd3Q99LE3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd3Q99LE3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.58■■□□□ 1.05
Lysmd3Q99LE3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lysmd3Q99LE3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.58■■□□□ 1.05
Lysmd3Q99LE3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lysmd3Q99LE3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Lysmd3Q99LE3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lysmd3Q99LE3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Gm9847-201ENSMUST00000052528 599 ntBASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.55■■□□□ 1.04
Lysmd3Q99LE3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.54■■□□□ 1.04
Lysmd3Q99LE3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd3Q99LE3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lysmd3Q99LE3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.54■■□□□ 1.04
Lysmd3Q99LE3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd3Q99LE3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd3Q99LE3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.53■■□□□ 1.04
Lysmd3Q99LE3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd3Q99LE3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lysmd3Q99LE3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd3Q99LE3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lysmd3Q99LE3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.52■■□□□ 1.04
Lysmd3Q99LE3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Lysmd3Q99LE3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.52■■□□□ 1.04
Lysmd3Q99LE3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lysmd3Q99LE3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Gm12922-201ENSMUST00000120626 809 ntBASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Gm13241-201ENSMUST00000094493 780 ntBASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lysmd3Q99LE3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lysmd3Q99LE3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd3Q99LE3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd3Q99LE3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd3Q99LE3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lysmd3Q99LE3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.49■■□□□ 1.03
Lysmd3Q99LE3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.48■■□□□ 1.03
Lysmd3Q99LE3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd3Q99LE3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lysmd3Q99LE3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms