Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk9Q99J95 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk9Q99J95 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk9Q99J95 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk9Q99J95 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdk9Q99J95 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.79■□□□□ 0.92
Cdk9Q99J95 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdk9Q99J95 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdk9Q99J95 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.76■□□□□ 0.91
Cdk9Q99J95 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Scarna2-201ENSMUST00000157560 414 ntBASIC20.76■□□□□ 0.91
Cdk9Q99J95 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cdk9Q99J95 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk9Q99J95 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk9Q99J95 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.75■□□□□ 0.91
Cdk9Q99J95 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.75■□□□□ 0.91
Cdk9Q99J95 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdk9Q99J95 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cdk9Q99J95 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk9Q99J95 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk9Q99J95 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk9Q99J95 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Cdk9Q99J95 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk9Q99J95 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdk9Q99J95 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.73■□□□□ 0.91
Cdk9Q99J95 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Gm9806-201ENSMUST00000051080 552 ntBASIC20.73■□□□□ 0.91
Cdk9Q99J95 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.73■□□□□ 0.91
Cdk9Q99J95 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdk9Q99J95 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Cdk9Q99J95 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdk9Q99J95 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk9Q99J95 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk9Q99J95 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdk9Q99J95 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cdk9Q99J95 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.71■□□□□ 0.91
Cdk9Q99J95 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cdk9Q99J95 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Gm11687-201ENSMUST00000118911 886 ntBASIC20.7■□□□□ 0.9
Cdk9Q99J95 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.7■□□□□ 0.9
Cdk9Q99J95 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdk9Q99J95 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Cdk9Q99J95 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms