Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb2Q91Y00 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhb2Q91Y00 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhb2Q91Y00 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Gm22238-201ENSMUST00000175222 88 ntBASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhb2Q91Y00 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhb2Q91Y00 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.02■■□□□ 1.12
Pcdhb2Q91Y00 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhb2Q91Y00 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhb2Q91Y00 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhb2Q91Y00 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb2Q91Y00 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb2Q91Y00 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdhb2Q91Y00 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdhb2Q91Y00 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhb2Q91Y00 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb2Q91Y00 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb2Q91Y00 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms