Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx1Q91VR5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.54■■□□□ 1.04
Ddx1Q91VR5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Ddx1Q91VR5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx1Q91VR5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx1Q91VR5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx1Q91VR5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx1Q91VR5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx1Q91VR5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx1Q91VR5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.51■■□□□ 1.03
Ddx1Q91VR5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx1Q91VR5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx1Q91VR5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx1Q91VR5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx1Q91VR5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ddx1Q91VR5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx1Q91VR5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx1Q91VR5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ddx1Q91VR5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx1Q91VR5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx1Q91VR5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx1Q91VR5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.44■■□□□ 1.02
Ddx1Q91VR5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx1Q91VR5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx1Q91VR5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx1Q91VR5 Gm12821-201ENSMUST00000120022 600 ntBASIC21.43■■□□□ 1.02
Ddx1Q91VR5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx1Q91VR5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx1Q91VR5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx1Q91VR5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx1Q91VR5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx1Q91VR5 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.42■■□□□ 1.02
Ddx1Q91VR5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx1Q91VR5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx1Q91VR5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.4■■□□□ 1.02
Ddx1Q91VR5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.4■■□□□ 1.02
Ddx1Q91VR5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ddx1Q91VR5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms