Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim60Q8VI40 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim60Q8VI40 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Trim60Q8VI40 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim60Q8VI40 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Gm10420-201ENSMUST00000121713 882 ntBASIC21.45■■□□□ 1.02
Trim60Q8VI40 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim60Q8VI40 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim60Q8VI40 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim60Q8VI40 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim60Q8VI40 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim60Q8VI40 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.44■■□□□ 1.02
Trim60Q8VI40 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Trim60Q8VI40 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Trim60Q8VI40 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.43■■□□□ 1.02
Trim60Q8VI40 Mir6538-201ENSMUST00000183713 110 ntBASIC21.43■■□□□ 1.02
Trim60Q8VI40 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Trim60Q8VI40 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.42■■□□□ 1.02
Trim60Q8VI40 Gm12366-201ENSMUST00000121722 873 ntBASIC21.42■■□□□ 1.02
Trim60Q8VI40 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Trim60Q8VI40 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.42■■□□□ 1.02
Trim60Q8VI40 Gm5786-201ENSMUST00000085368 882 ntBASIC21.42■■□□□ 1.02
Trim60Q8VI40 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim60Q8VI40 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim60Q8VI40 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.4■■□□□ 1.02
Trim60Q8VI40 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.4■■□□□ 1.02
Trim60Q8VI40 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trim60Q8VI40 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim60Q8VI40 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.4■■□□□ 1.02
Trim60Q8VI40 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Trim60Q8VI40 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim60Q8VI40 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim60Q8VI40 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Trim60Q8VI40 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim60Q8VI40 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim60Q8VI40 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim60Q8VI40 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim60Q8VI40 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim60Q8VI40 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim60Q8VI40 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim60Q8VI40 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim60Q8VI40 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms