Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rab40cQ8VHQ4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.91■□□□□ 0.3
Rab40cQ8VHQ4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rab40cQ8VHQ4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rab40cQ8VHQ4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rab40cQ8VHQ4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rab40cQ8VHQ4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rab40cQ8VHQ4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rab40cQ8VHQ4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab40cQ8VHQ4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms