Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp40Q8R1F9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Rpp40Q8R1F9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpp40Q8R1F9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.37■■□□□ 1.17
Rpp40Q8R1F9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rpp40Q8R1F9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Rpp40Q8R1F9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp40Q8R1F9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp40Q8R1F9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.35■■□□□ 1.17
Rpp40Q8R1F9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp40Q8R1F9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.35■■□□□ 1.17
Rpp40Q8R1F9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.34■■□□□ 1.17
Rpp40Q8R1F9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.33■■□□□ 1.17
Rpp40Q8R1F9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp40Q8R1F9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp40Q8R1F9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rpp40Q8R1F9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rpp40Q8R1F9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rpp40Q8R1F9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp40Q8R1F9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.3■■□□□ 1.16
Rpp40Q8R1F9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Rpp40Q8R1F9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Rpp40Q8R1F9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.3■■□□□ 1.16
Rpp40Q8R1F9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rpp40Q8R1F9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp40Q8R1F9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp40Q8R1F9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp40Q8R1F9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp40Q8R1F9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp40Q8R1F9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.27■■□□□ 1.16
Rpp40Q8R1F9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp40Q8R1F9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp40Q8R1F9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp40Q8R1F9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rpp40Q8R1F9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Rpp40Q8R1F9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.26■■□□□ 1.15
Rpp40Q8R1F9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rpp40Q8R1F9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rpp40Q8R1F9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rpp40Q8R1F9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rpp40Q8R1F9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms