Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm21956-201ENSMUST00000179946 522 ntBASIC25.72■■□□□ 1.71
Smc4Q8CG47 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Smc4Q8CG47 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Smc4Q8CG47 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Smc4Q8CG47 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Smc4Q8CG47 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Smc4Q8CG47 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Smc4Q8CG47 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.7■■□□□ 1.7
Smc4Q8CG47 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.7■■□□□ 1.7
Smc4Q8CG47 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Smc4Q8CG47 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.69■■□□□ 1.7
Smc4Q8CG47 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Smc4Q8CG47 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Smc4Q8CG47 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Smc4Q8CG47 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc4Q8CG47 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc4Q8CG47 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.67■■□□□ 1.7
Smc4Q8CG47 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Smc4Q8CG47 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Smc4Q8CG47 AC164883.3-201ENSMUST00000227396 1774 ntBASIC25.67■■□□□ 1.7
Smc4Q8CG47 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Smc4Q8CG47 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smc4Q8CG47 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Smc4Q8CG47 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Smc4Q8CG47 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.64■■□□□ 1.7
Smc4Q8CG47 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Smc4Q8CG47 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Smc4Q8CG47 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.64■■□□□ 1.7
Smc4Q8CG47 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC25.64■■□□□ 1.7
Smc4Q8CG47 Gm7143-201ENSMUST00000222811 859 ntBASIC25.64■■□□□ 1.7
Smc4Q8CG47 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Smc4Q8CG47 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
Smc4Q8CG47 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Smc4Q8CG47 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Smc4Q8CG47 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Smc4Q8CG47 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc4Q8CG47 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc4Q8CG47 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Smc4Q8CG47 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
Smc4Q8CG47 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.62■■□□□ 1.69
Smc4Q8CG47 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Smc4Q8CG47 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Smc4Q8CG47 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Smc4Q8CG47 Gm12821-201ENSMUST00000120022 600 ntBASIC25.61■■□□□ 1.69
Smc4Q8CG47 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Smc4Q8CG47 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Smc4Q8CG47 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Smc4Q8CG47 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Smc4Q8CG47 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Smc4Q8CG47 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.6■■□□□ 1.69
Smc4Q8CG47 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc4Q8CG47 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc4Q8CG47 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc4Q8CG47 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.59■■□□□ 1.69
Smc4Q8CG47 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.59■■□□□ 1.69
Smc4Q8CG47 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Smc4Q8CG47 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Smc4Q8CG47 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Smc4Q8CG47 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc4Q8CG47 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Smc4Q8CG47 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Smc4Q8CG47 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
Smc4Q8CG47 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.57■■□□□ 1.68
Smc4Q8CG47 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC25.57■■□□□ 1.68
Smc4Q8CG47 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Smc4Q8CG47 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms