Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
Trim52Q8CDV4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC26.08■■□□□ 1.77
Trim52Q8CDV4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim52Q8CDV4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim52Q8CDV4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim52Q8CDV4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim52Q8CDV4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Trim52Q8CDV4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Trim52Q8CDV4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim52Q8CDV4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim52Q8CDV4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim52Q8CDV4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC26.04■■□□□ 1.76
Trim52Q8CDV4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim52Q8CDV4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim52Q8CDV4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim52Q8CDV4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Trim52Q8CDV4 Gm43137-201ENSMUST00000198052 594 ntBASIC26.01■■□□□ 1.75
Trim52Q8CDV4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.01■■□□□ 1.75
Trim52Q8CDV4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim52Q8CDV4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC26■■□□□ 1.75
Trim52Q8CDV4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim52Q8CDV4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim52Q8CDV4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Trim52Q8CDV4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim52Q8CDV4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim52Q8CDV4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim52Q8CDV4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Trim52Q8CDV4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC25.99■■□□□ 1.75
Trim52Q8CDV4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Trim52Q8CDV4 Gm6139-201ENSMUST00000079261 882 ntBASIC25.99■■□□□ 1.75
Trim52Q8CDV4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Trim52Q8CDV4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim52Q8CDV4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.98■■□□□ 1.75
Trim52Q8CDV4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim52Q8CDV4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Trim52Q8CDV4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim52Q8CDV4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim52Q8CDV4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim52Q8CDV4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim52Q8CDV4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Trim52Q8CDV4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim52Q8CDV4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim52Q8CDV4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim52Q8CDV4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim52Q8CDV4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Trim52Q8CDV4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Trim52Q8CDV4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.91■■□□□ 1.74
Trim52Q8CDV4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms