Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cstf2tQ8C7E9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cstf2tQ8C7E9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cstf2tQ8C7E9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cstf2tQ8C7E9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cstf2tQ8C7E9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cstf2tQ8C7E9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cstf2tQ8C7E9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.25■□□□□ 0.99
Cstf2tQ8C7E9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cstf2tQ8C7E9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.25■□□□□ 0.99
Cstf2tQ8C7E9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.25■□□□□ 0.99
Cstf2tQ8C7E9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.25■□□□□ 0.99
Cstf2tQ8C7E9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Gm8493-201ENSMUST00000196881 489 ntBASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cstf2tQ8C7E9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cstf2tQ8C7E9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cstf2tQ8C7E9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cstf2tQ8C7E9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cstf2tQ8C7E9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.19■□□□□ 0.98
Cstf2tQ8C7E9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cstf2tQ8C7E9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cstf2tQ8C7E9 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.17■□□□□ 0.98
Cstf2tQ8C7E9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cstf2tQ8C7E9 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.16■□□□□ 0.98
Cstf2tQ8C7E9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms