Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11541Q8C4D8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11541Q8C4D8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11541Q8C4D8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm11541Q8C4D8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm11541Q8C4D8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm11541Q8C4D8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm11541Q8C4D8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11541Q8C4D8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Gm11541Q8C4D8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Gm5812-201ENSMUST00000061073 957 ntBASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11541Q8C4D8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11541Q8C4D8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11541Q8C4D8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Gm15820-201ENSMUST00000201566 728 ntBASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Gm10232-201ENSMUST00000089221 720 ntBASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11541Q8C4D8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms