Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Brat1Q8C3R1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Brat1Q8C3R1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Brat1Q8C3R1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Brat1Q8C3R1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Brat1Q8C3R1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Brat1Q8C3R1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.95■■□□□ 1.1
Brat1Q8C3R1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Brat1Q8C3R1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Brat1Q8C3R1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Brat1Q8C3R1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Brat1Q8C3R1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Brat1Q8C3R1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Brat1Q8C3R1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Brat1Q8C3R1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
Brat1Q8C3R1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Brat1Q8C3R1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Brat1Q8C3R1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Brat1Q8C3R1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Brat1Q8C3R1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Brat1Q8C3R1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Brat1Q8C3R1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Brat1Q8C3R1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
Brat1Q8C3R1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.88■■□□□ 1.09
Brat1Q8C3R1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.87■■□□□ 1.09
Brat1Q8C3R1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Brat1Q8C3R1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Brat1Q8C3R1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Brat1Q8C3R1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.84■■□□□ 1.09
Brat1Q8C3R1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms